BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037C01SP1|AL430356
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1566 1733 0.0
>3x_Contig1566
Length = 10355
Score = 1733 bits (869), Expect = 0.0
Identities = 887/897 (98%), Gaps = 1/897 (0%)
Strand = Plus / Minus
Query: 1 gatcttcaaacgctaattagacaagtggtgaaatactttaatgggaaggtttctttggag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3902 gatcttcaaacgctatttagacaagtggtgaaatactttaatgggaaggtttctttggag 3843
Query: 61 tacattatgattaaggaaggtattcctaaaaatgagataaaaagattgcttcaggcctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3842 tacattatgattaaggaaggtattcctaaaaatgagataaaaagattgcttcaggcctta 3783
Query: 121 ggtaagtacatcgttgaagtaaaacactggtaaatgccctatccccttacattgttattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3782 ggtaagtacatcgttgaagtaaaacactggtaaatgccctatccccttacattgttattc 3723
Query: 181 ttctaatcgattctacgcacaggattttgtcaatgcataataattaagtactatataata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3722 ttctaatcgattctacgcacaggattttgtcaatgcataataattaagtactatataata 3663
Query: 241 agccatttttggagttgcataactttatgtcataactaatcaattcactgtgttttatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3662 agccatttttggagttgcataactttatgtcataactaatcaattcactgtgttttatat 3603
Query: 301 tttttgttttgcatgttgtaaccataacagtttgtaattccggagaagctcgaacagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3602 tttttgttttgcatgttgtaaccataacagtttgtaattccggagaagctcgaacagaaa 3543
Query: 361 acatatctatatatatatgccatgcatgtmaagtttaagatgatatcttaagtttattta 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3542 acatatctatatatatatgccatgcatgtaaagtttaagatgatatcttaagtttattta 3483
Query: 421 tctaamagagaaggacatgtacaaatgaaacgccactggggaacatattataagacggtg 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3482 tctaaaagagaaggacatgtacaaatgaaacgccactggggaacatattataagacggtg 3423
Query: 481 ccgagtatatgccctgtggttgactaamaagaaggtgaaamagagttaatcactaggagg 540
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 3422 ccgagtatatgccctgtggttgactaaaaagaaggtgaaaaagagttaatcactaggagg 3363
Query: 541 gcctaagatagtgcaatgattacgctaaaaammagtagaaagamaatgacatattcaata 600
||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 3362 gcctaagatagtgcaatgattacgctaaaaaaaagtagaaagaaaatgacatattcaata 3303
Query: 601 gtcgaggtctgctttatcatgtccagagacagaattatccaaatagttcataccgcca-g 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3302 gtcgaggtctgctttatcatgtccagagacagaattatccaaatagttcataccgccagg 3243
Query: 660 gtgttcgtgtgggaatggattaktaaatgtcggtgtaggaggtggcatagggaagtaata 719
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3242 gtgttcgtgtgggaatggattagtaaatgtcggtgtaggaggtggcatagggaagtaata 3183
Query: 720 aaagaatggggaatgttgagaaggtggacactgtcccgtcaagtgagcgcccggctgaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3182 aaagaatggggaatgttgagaaggtggacactgtcccgtcaagtgagcgcccggctgaat 3123
Query: 780 caagtgagagggcggagggccaacggggctaccagaaggtggacagtactccattgggta 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3122 caagtgagagggcggagggccaacggggctaccagaaggtggacagtactccattgggta 3063
Query: 840 gtacactggcgggccgtagtagaaatttggatccatcctaccatgccttggtgcatc 896
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3062 gtacactggcgggccgtagtagaaatttggatccatcctaccatgccttggtgcatc 3006
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7654
Number of Sequences: 1807
Number of extensions: 7654
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)